.. _tutorials_section:

Tutorials 
=========

Using transmorph within a scanpy pipeline
-----------------------------------------

.. toctree::
    :maxdepth: 2

    notebooks/with_scanpy


Presenting the pre-built models
-------------------------------

.. toctree::
    :maxdepth: 2

    notebooks/emsup_zhou_integration
    notebooks/em_chen_integration
    notebooks/lc_chen_integration
    notebooks/cell_cycle_integration


Building models with the model API
----------------------------------

.. toctree::
    :maxdepth: 2

    notebooks/create_model
    notebooks/model_api_transformations
    notebooks/model_api_matchings
    notebooks/model_api_mergings